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Centre for Misfolding Diseases

Dr Max Bonomi

Research Associate

Publications

Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data.
M Bonomi, R Pellarin, SJ Kim, D Russel, BA Sundin, M Riffle, D Jaschob, R Ramsden, TN Davis, EGD Muller, A Sali
– Molecular & Cellular Proteomics
(2014)
13,
2812
(doi: 10.1074/mcp.m114.040824)
Cys-Scanning Disulfide Cross linking and Bayesian Modeling Probe the Transmembrane Signaling Mechanism of the Histidine Kinase, PhoQ
KS Molnar, M Bonomi, R Pellarin, GD Clinthorne, G Gonzalez, SD Goldberg, M Goulian, A Sali, WF DeGrado
– Structure
(2014)
22,
1239
(doi: 10.1016/j.str.2014.04.019)
Elucidating the mechanism of substrate recognition by the bacterial Hsp90 molecular chaperone
TO Street, X Zeng, R Pellarin, M Bonomi, A Sali, MJS Kelly, F Chu, DA Agard
– Journal of Molecular Biology
(2014)
426,
2393
(doi: 10.1016/j.jmb.2014.04.001)
Elucidating the Mechanism of Substrate Recognition by the Bacterial Hsp90 Molecular Chaperone
TO Street, X Zeng, R Pellarin, M Bonomi, A Sali, MJS Kelly, F Chu, DA Agard
– Journal of Molecular Biology
(2014)
426,
2393
(doi: 10.1016/j.jmb.2014.04.001)
The free energy profile of tubulin straight-bent conformational changes, with implications for microtubule assembly and drug discovery.
LX Peng, MT Hsu, M Bonomi, DA Agard, MP Jacobson
– PLOS Computational Biology
(2014)
10,
e1003464
(doi: 10.1371/journal.pcbi.1003464)
PLUMED 2: New feathers for an old bird
GA Tribello, M Bonomi, D Branduardi, C Camilloni, G Bussi
– Computer Physics Communications
(2014)
185,
604
(doi: 10.1016/j.cpc.2013.09.018)
Modeling of proteins and their assemblies with the integrative modeling platform
B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, R Pellarin, M Bonomi, C Greenberg, B Raveh, E Tjioe, D Russel, A Sali
– Methods in Molecular Biology
(2014)
1091,
277
(doi: 10.1007/978-1-62703-691-7_20)
Free-energy landscape of protein oligomerization from atomistic simulations.
A Barducci, M Bonomi, MK Prakash, M Parrinello
– Proc Natl Acad Sci U S A
(2013)
110,
e4708
(doi: 10.1073/pnas.1320077110)
Modeling of proteins and their assemblies with the integrative modeling platform
B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, R Pellarin, M Bonomi, C Greenberg, B Raveh, E Tjioe, D Russel, A Sali
– Methods Mol Biol
(2013)
1091,
277
(doi: 10.1007/978-1-62703-691-7_20)
Structural basis for alternating access of a eukaryotic calcium/proton exchanger
AB Waight, BP Pedersen, A Schlessinger, M Bonomi, BH Chau, Z Roe-Zurz, AJ Risenmay, A Sali, RM Stroud
– Nature
(2013)
499,
107
(doi: 10.1038/nature12233)
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Postdoctoral researcher

Telephone number

01223 336366 (shared)

    Study at Cambridge

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    Research at Cambridge