Centre for Misfolding Diseases

Dr Max Bonomi

Research Associate

Publications

Determining Protein Complex Structures Based on a Bayesian Model of in Vivo Forster Resonance Energy Transfer (FRET) Data
M Bonomi, R Pellarin, SJ Kim, D Russel, BA Sundin, M Riffle, D Jaschob, R Ramsden, TN Davis, EGD Muller, A Sali
Molecular & Cellular Proteomics
(2014)
13
(doi: 10.1074/mcp.M114.040824)
Cys-Scanning Disulfide Cross linking and Bayesian Modeling Probe the Transmembrane Signaling Mechanism of the Histidine Kinase, PhoQ
KS Molnar, M Bonomi, R Pellarin, GD Clinthorne, G Gonzalez, SD Goldberg, M Goulian, A Sali, WF DeGrado
Structure (London, England : 1993)
(2014)
22
(doi: 10.1016/j.str.2014.04.019)
Elucidating the mechanism of substrate recognition by the bacterial Hsp90 molecular chaperone
TO Street, X Zeng, R Pellarin, M Bonomi, A Sali, MJS Kelly, F Chu, DA Agard
Journal of Molecular Biology
(2014)
426
(doi: 10.1016/j.jmb.2014.04.001)
Elucidating the Mechanism of Substrate Recognition by the Bacterial Hsp90 Molecular Chaperone
TO Street, X Zeng, R Pellarin, M Bonomi, A Sali, MJS Kelly, F Chu, DA Agard
Journal of molecular biology
(2014)
426
(doi: 10.1016/j.jmb.2014.04.001)
The Free Energy Profile of Tubulin Straight-Bent Conformational Changes, with Implications for Microtubule Assembly and Drug Discovery
LX Peng, MT Hsu, M Bonomi, DA Agard, MP Jacobson
PLoS Computational Biology
(2014)
10
(doi: 10.1371/journal.pcbi.1003464)
PLUMED 2: New feathers for an old bird
GA Tribello, M Bonomi, D Branduardi, C Camilloni, G Bussi
Computer Physics Communications
(2014)
185
(doi: 10.1016/j.cpc.2013.09.018)
Modeling of proteins and their assemblies with the integrative modeling platform
B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, R Pellarin, M Bonomi, C Greenberg, B Raveh, E Tjioe, D Russel, A Sali
Methods in Molecular Biology
(2014)
1091
(doi: 10.1007/978-1-62703-691-7_20)
Free-energy landscape of protein oligomerization from atomistic simulations
A Barducci, M Bonomi, MK Prakash, M Parrinello
Proc Natl Acad Sci U S A
(2013)
110
(doi: 10.1073/pnas.1320077110)
Modeling of Proteins and Their Assemblies with the Integrative Modeling Platform
B Webb, K Lasker, J Velázquez-Muriel, D Schneidman-Duhovny, R Pellarin, M Bonomi, C Greenberg, B Raveh, E Tjioe, D Russel, A Sali
Methods Mol Biol
(2013)
1091
(doi: 10.1007/978-1-62703-691-7_20)
Structural basis for alternating access of a eukaryotic calcium/proton exchanger
AB Waight, BP Pedersen, A Schlessinger, M Bonomi, BH Chau, Z Roe-Zurz, AJ Risenmay, A Sali, RM Stroud
Nature
(2013)
499
(doi: 10.1038/nature12233)

Postdoctoral researcher

Yusuf Hamied Department of Chemistry
Lensfield Road
Cambridge
CB2 1EW
T: +44 (0) 1223 336300
enquiries@ch.cam.ac.uk
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