Professor of Biophysics


Our research

In the last 15 years our research has been focused on the development of methods of characterising the structure, dynamics and interactions of proteins in previously inaccessible states. These methods are based on the use of experimental data, in particular from nuclear magnetic resonance spectroscopy, as structural restraints in molecular dynamics simulations. Through this approach it is possible to obtain information about a variety of protein conformations, as for example those populated during the folding process, and about protein interactions in complex environments, including those generating aggregate species that are associated with neurodegenerative disorders such as Alzheimer's and Parkinson's diseases.

Application to neurodegenerative diseases

More recently, these studies have led us to investigate the physico-chemical principles of proteins homeostasis and their application to the development of therapeutic strategies against neurodegenerative diseases. Starting from the observation that proteins are expressed in the cell at levels close to their solubility limits, we are developing approaches to prevent or delay misfolding disorders based on the enhancement of our quality control mechanisms against protein aggregation.

Watch Professor Vendruscolo discuss his research

Take a tour of the Una Finlay Laboratory in the Centre for Misfolding Diseases

Publications

Analysis of the distributed computing approach applied to the folding of a small beta peptide
E Paci, A Cavalli, M Vendruscolo, A Caflisch
Proceedings of the National Academy of Sciences
(2003)
100
Protein folding and misfolding: A paradigm of self-assembly and regulation in complex biological systems
M Vendruscolo, J Zurdo, CE MacPhee, CM Dobson
Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences
(2003)
361
Connectivity of neutral networks, overdispersion, and structural conservation in protein evolution.
U Bastolla, M Porto, MH Eduardo Roman, MH Vendruscolo
Journal of Molecular Evolution
(2003)
56
Protein folding: bringing theory and experiment closer together.
M Vendruscolo, E Paci
Curr Opin Struct Biol
(2003)
13
Self-consistent determination of the transition state for protein folding: application to a fibronectin type III domain.
E Paci, J Clarke, A Steward, M Vendruscolo, M Karplus
Proceedings of the National Academy of Sciences of the United States of America
(2003)
100
Protein folding using contact maps and contact vectors
M Vendruscolo
ARTIFICIAL INTELLIGENCE AND HEURISTIC METHODS IN BIOINFORMATICS
(2003)
183
Validity of Gō Models: Comparison with a Solvent-Shielded Empirical Energy Decomposition
E Paci, M Vendruscolo, M Karplus
Biophys J
(2002)
83
Determination of the structures of distinct transition state ensembles for a beta-sheet peptide with parallel folding pathways
R Davis, CM Dobson, M Vendruscolo
The Journal of Chemical Physics
(2002)
117
Determination of a transition state at atomic resolution from protein engineering data.
E Paci, M Vendruscolo, CM Dobson, M Karplus
Journal of Molecular Biology
(2002)
324
Lack of self-averaging in neutral evolution of proteins - art. no. 208101
U Bastolla, M Porto, HE Roman, M Vendruscolo
Physical review letters
(2002)
89

Co-Director

Research Interest Groups

Telephone number

01223 763873

Email address