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Centre for Misfolding Diseases

Dr Predrag Kukic

Research Associate

 

Research Interests

Computational Chemistry, Molecular Dynamics, Soft matter, Biophysics, NMR, Bioinformatics, Physical approaches to biologically inspired problems

 

 

Publications

A Phosphorylation-Induced Turn Defines the Alzheimer's Disease AT8 Antibody Epitope on the Tau Protein
NS Gandhi, I Landrieu, C Byrne, P Kukic, L Amniai, F-X Cantrelle, J-M Wieruszeski, RL Mancera, Y Jacquot, G Lippens
– Angew Chem Int Ed Engl
(2015)
54,
6819
(doi: 10.1002/anie.201501898)
Structure and Dynamics of the Integrin LFA-1 I-Domain in the Inactive State Underlie its Inside-Out/Outside-In Signaling and Allosteric Mechanisms
P Kukic, HT Alvin Leung, F Bemporad, FA Aprile, JR Kumita, A De Simone, C Camilloni, M Vendruscolo
– Structure (London, England : 1993)
(2015)
23,
745
(doi: 10.1016/j.str.2014.12.020)
NMR characterization of the conformational fluctuations of the human lymphocyte function-associated antigen-1 I-domain.
HTA Leung, P Kukic, C Camilloni, F Bemporad, A De Simone, FA Aprile, JR Kumita, M Vendruscolo
– Protein Science
(2014)
23,
1596
(doi: 10.1002/pro.2538)
Determination of the individual roles of the linker residues in the interdomain motions of calmodulin using NMR chemical shifts
P Kukic, C Camilloni, A Cavalli, M Vendruscolo
– Journal of Molecular Biology
(2014)
106,
636A
(doi: 10.1016/j.bpj.2013.11.3516)
Determination of the individual roles of the linker residues in the interdomain motions of calmodulin using NMR chemical shifts.
P Kukic, C Camilloni, A Cavalli, M Vendruscolo
– J Mol Biol
(2014)
426,
1826
(doi: 10.1016/j.jmb.2014.02.002)
Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks
P Kukic, C Mirabello, G Tradigo, I Walsh, P Veltri, G Pollastri
– BMC bioinformatics
(2014)
15,
6
(doi: 10.1186/1471-2105-15-6)
Elucidating the Structural Basis of α-Synuclein Fibrillation using Small Camelid Nanobodies
F El Turk, G Tomba, E De Genst, T Guillams, P Kukic, M Vendruscolo, C Dobson
– Biophysical Journal
(2014)
106,
257a
(doi: 10.1016/j.bpj.2013.11.1512)
MD Simulations of Intrinsically Disordered Proteins with Replica-Averaged Chemical Shift Restraints
B Fu, P Kukic, C Camilloni, M Vendruscolo
– Biophysical Journal
(2014)
106,
481a
(doi: 10.1016/j.bpj.2013.11.2714)
Protein Dielectric Constants Determined from NMR Chemical Shift Perturbations
P Kukic, D Farrell, LP McIntosh, B García-Moreno E, KS Jensen, Z Toleikis, K Teilum, JE Nielsen
– J Am Chem Soc
(2013)
135,
16968
(doi: 10.1021/ja406995j)
Coupled effect of salt and pH on proteins probed with NMR spectroscopy
P Kukic, F O'Meara, C Hewage, J Erik Nielsen
– Chemical Physics Letters
(2013)
579,
114
(doi: 10.1016/j.cplett.2013.06.034)
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